Convert Annotations from XML

Description

Convert Compumedics (ProFusion) XML annotation files into Snooz ‘.tsv’ annotation files.

The converter looks for the following fields:

  • EpochLength (optional)

  • ScoredEvents

    • Name

    • Start

    • Duration

    • Input

    • EventName (optional)

  • SleepStages

An example of an XML file is shown below :

<CMPStudyConfig>
    <EpochLength>30</EpochLength>
<ScoredEvents>
    <ScoredEvent>
        <Name>SpO2 artifact</Name>
        <Start>0</Start>
        <Duration>10</Duration>
        <Input>SaO2</Input>
        <EventName>Art</EventName>
    </ScoredEvent>
</ScoredEvents>
<SleepStages>
    <SleepStage>0</SleepStage>
    <SleepStage>0</SleepStage>
</SleepStages>

Note

XML files generated by the ‘Convertisseur d’enregistrements polysomnographiques’ from the foundational version of the CEAMS library are supported.

Steps

1 - Input Files

Add the .xml annotation files to convert to Snooz .tsv annotation file. (No edf file needed, only the xml file is mandatory).

Version History

  • v2.0.0Distributed with CEAMS package version 7.2.0 — Snooz beta 2.0.1

    • Initial release of the tool.

  • v2.2.0Distributed with CEAMS package version 7.3.0 — Snooz beta 3.0.0

    • Supports the new optional time elapsed column.