Convert Annotations from EDFbrowser

This tool converts EDFbrowser .txt annotation files to Snooz .tsv annotation files. In Snooz, annotations are grouped, a feature that does not exist in EDFbrowser. This tool allows you to add annotations to the ‘stage’ and ‘art_snooz’ groups. Additionally, you can optionally add any annotation to any group.

Steps

1 - Input Files

Add the .txt annotation files to convert to Snooz .tsv annotation file.

Define the column index of each annotation feature

  • Event group : none in EDFbrowser

  • Event name (description label) : column 3

  • Event onset (starting point) : column 1

  • Event duration : column 2

  • Event channel : none because EDFbrowser includes it in the event name

2 - Stage Annotation Selection

Check all the annotation names that correspond to the sleep stages. The event group “stage” will be added to those annotations for further analyses in Snooz.

3- Artifact Annotation Selection

Check all the annotation names that correspond to the artifacts. The event group “art_snooz” will be added to those annotations for further analyses in Snooz.

4- Event Group Definition

Edit the annotation group as you wish. The default group is EDFbrowser.

Note

Enjoy the push button “Apply to all files” to convert files in batch.

Look at the “Convert Annotations from EDFbrowser” home page and the step pages for more information.

Warning

Make sure to rename the output file properly.

In Snooz, the PSG files must have the same name as the annotation files.

i.e. subject1.edf and subject1.tsv is valid

i.e. subject1.edf and subject1_annotation.tsv is not valid

Version History

  • v2.0.0Distributed with CEAMS package version 7.2.0 — Snooz beta 2.0.1

    • Initial release of the tool.

  • v2.1.0Distributed with CEAMS package version 7.3.0 — Snooz beta 3.0.0

    • Supports the new optional time elapsed column.